Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936451.1_cds_XP_016482030.1_73299
CDS Infomation

[gene=LOC107802958] [db_xref=GeneID:107802958] [protein=DNA polymerase I A, chloroplastic/mitochondrial-like] [partial=3'] [protein_id=XP_016482030.1] [location=complement(join(<7..41,255..449,531..623,999..1094,2115..2571,3392..4083,4248..4439,4577..5627,6466..6590))] [gbkey=CDS]
Sequence

ATGGCATTCTTGGGGTTCTCAGTTCAGTCTTCCCCTTTCAAACCCACCTCTTATCTTTGG
TTTTCCCCTCATTCCTTCTCCTCTTCTCGCTCCTTTTGGGCTTCTTCTGGTAAAGCCCTC
CACAGGAGGGAAGATTGCAAAACTCAGAGTGTAGAAAATGCATCGTCCAGCTTAGCAGTG
CTTGGCGATTCCATTAAACAAATATCAAGTCACGAAAGGAAGTTATTTTCTAGTGGACTA
CAACATAAAATTGAGGAAGACAGTACTTACGGATGGATCGCTGAAACTAATGCTCTTAAA
GCTTCTAAAGCTAAAAGCTCTTATAATAGTTACAAAAAGATTTCAGCAGCAAATTGCAAT
GTTAGTGCCTCTACAAATCGGAGGGTGAAAGATGAATTTTTTGATGTTCCAACTGAAGTC
AATACGAGAATGATGCGTGAACGCATCACCTCTAGCTATTCTGCCACAACCTGTATTTCA
GGAGGCAACTTATCTTCAAAAAGCAAACCACCTTATAACCCTGCTGGAGGAGAAAAGAAG
GTAGTTGGAAACTGGAGAGAGTATGAAAACCATTTGCCACAAGTATCTGTAGGTCTTACC
CATTCAAGAGTCAATGGAGCTAGGTCAGTAAATAAGGTTGATGGTTCTAATGTATCTCAT
TACAAACCCTTATCAAAAGGTTCCCATCTTAATGGGCAATTATCAAGCAAAATTATGGAA
GCAAAGTTGGAGAAGGTAAATAAACTAAGGGAGGGTCATGCATCTGATCAACTAAGACAC
AGTGTGAATGGGACCGAGACCAAGGTAGTTACTGTCAAAGCAAAAGGTGTTATCCAGGAG
CGTGCTATGAATAAAATGGAGAAGAATGTAATTCAAGCCGTGACAGCTGATGTCATGAAT
GGAGCTGAGGCCAATGCAAAAGGGGTTATCCTGGAGCGTGCAACTAATAAAATGGAAAAG
AATGCAATTGAATCCATGGCAACTGATGTCGTGAATGGAACCAAGACTAGGATTGTCAAT
GATGAAGGAACAGGTGTAAGTCAGGTTTCCCTCCGTGAGAGGCTGGGTGCAATGTATGAC
AAAGTTCATATAGTTGACAATTTATCAGCAGCTAAGGAAGTTGTCAGAAAGCTTACAAGT
CAGTACAGGCATCTCGTCCATGCGTGTGATACAGAGGTAGCAAAGATTGATGTTAAGCAG
CAAACACCTGTTGATCATGGAGAAATTATATGCTTCAGTATTTATTCTGGACCAGAGGCT
GATTTTGGTGATGGGAAATCTTGTATCTGGGTAGATGTTCTTGATGGAGATGGCAAGAAC
CTCTTAGTTGAATTTGCTCCATTTTTCCAAGACCCATCCATTAGAAAGGTTTGGCACAAT
TATAGCTTTGACAACCATGTCATCGAGAACTATGGGTTTAAAGTATCTGGCTTTCACGCT
GACACAATGCACATGGCACGACTTTGGGATTCCTCTAGGCGAACTTCAGGTGGTTATTCA
CTAGAGGCACTAACAGGTGATTCCACTGTCATGCGTGATGCTAGACCGGTCCATGCTGAA
AGGCTGTTCCATGGTGAAGGTCTGTTTGGTAAAATATCTATGAAAACGATCTTTGGTCGG
AAAAAGCTGAAGAAAGACGGAACTGAGGGTAAAGTTACTGTCATTCCTTCTGTTGAAGAG
TTGCAAAAAACTGAAAGAGAATTATGGATTTGTTATTCTGCATTAGACTCCATAAGCACA
TTGATGCTTTACGAGAGTTTGAAGAATAAACTGGCTAAACGGATCTGGACATTCGATGGA
GTTCGTAAAGGATCGATGTATGAGTTTTATGAGAAATACTGGCGTCCATTTGGTGAGCTT
CTGGTTCAAATGGAAACTGAGGGTGTGCTGGTTGACCGTGCCTATCTTGCTGAGATTGAG
AAAGTGGCTAAAGCTGAGCAGCAGGTTGCTGCTAATAGATTTCGTAACTGGGCAGCTAAG
TACTGTCATGATGCAAAGTACATGAATGTTGGAAGTGATACACAGTTGCGTCAGCTGTTT
TTTGGTGGCATCCAGAATAGAAAGAATTCTGATGAGAGTCTACCATATGAGAAAGAATTC
AAAGTTCCAAATATCGATAAAGTAACTGAAGAAGGAAAGAAGGCTCCCACCAAATTTCGT
AAAATCCGACTACATAGAATTTGTGATCTTATCGACACTGAGATGTACACTGCCAGTGGC
TGGCCTTCTGTTAGTGGGGATGCTTTGAAGGCTCTCTCTGGCAAAGTTTCTGCGGACTTT
GATATTCTTGATGAAGCGGATGACAATGCTGAGGAAGATCCTGAAACAAGCATTGATGAA
GCTTTAGCTACAAATAATGAAGTTCCCAGTCAAGAACCAGAAGTTTCTATTTATGGATCA
GCGTACAACGCCTTTGGAGGTGGGCAGAAAGGAATTGAGGCCTGCCATGCCATTGCAGCA
TTATGTGAAATGTGCTCCATAGGCTCTTTAATATCCAACTTTATACTCCCATTGCAAGGC
CAAGATGTATCGGGTGAGAATGGACGAATTCATTGTTCCCTGAATATTAACACTGAAACC
GGGCGCCTGTCTGCGAGGAGACCAAATTTACAGAACCAGCCTGCTCTGGAGAAAGATAGG
TACAAAATTCGTCAAGCTTTTGTAGCTGCACAAGGGAATTCCTTGATTGTGGCCGACTAT
GGGCAGCTGGAACTTAGGATTCTTGCACATCTTGCCAACTGTAAGAGCATGTTGGATGCT
TTCAAAGCTGGTGGAGACTTTCATTCAAGGACTGCTATGAACATGTATACTCACATCCGT
GAAGCCGTTGAAAATGGTCAGGTACTTCTTGAGTGGCATCCTCAACCAGGTGAAGAAAAA
CCTCCGGTTCCTCTTCTAAAGGATGCTTTTGGCTCTGAAAGAAGGAAGGCAAAGAT

Peptide Sequence

PEP ID

XP_016482030.1
PEP Infomation

PREDICTED: DNA polymerase I A, chloroplastic/mitochondrial-like, partial [Nicotiana tabacum]
Sequence

MAFLGFSVQSSPFKPTSYLWFSPHSFSSSRSFWASSGKALHRREDCKTQSVENASSSLAV
LGDSIKQISSHERKLFSSGLQHKIEEDSTYGWIAETNALKASKAKSSYNSYKKISAANCN
VSASTNRRVKDEFFDVPTEVNTRMMRERITSSYSATTCISGGNLSSKSKPPYNPAGGEKK
VVGNWREYENHLPQVSVGLTHSRVNGARSVNKVDGSNVSHYKPLSKGSHLNGQLSSKIME
AKLEKVNKLREGHASDQLRHSVNGTETKVVTVKAKGVIQERAMNKMEKNVIQAVTADVMN
GAEANAKGVILERATNKMEKNAIESMATDVVNGTKTRIVNDEGTGVSQVSLRERLGAMYD
KVHIVDNLSAAKEVVRKLTSQYRHLVHACDTEVAKIDVKQQTPVDHGEIICFSIYSGPEA
DFGDGKSCIWVDVLDGDGKNLLVEFAPFFQDPSIRKVWHNYSFDNHVIENYGFKVSGFHA
DTMHMARLWDSSRRTSGGYSLEALTGDSTVMRDARPVHAERLFHGEGLFGKISMKTIFGR
KKLKKDGTEGKVTVIPSVEELQKTERELWICYSALDSISTLMLYESLKNKLAKRIWTFDG
VRKGSMYEFYEKYWRPFGELLVQMETEGVLVDRAYLAEIEKVAKAEQQVAANRFRNWAAK
YCHDAKYMNVGSDTQLRQLFFGGIQNRKNSDESLPYEKEFKVPNIDKVTEEGKKAPTKFR
KIRLHRICDLIDTEMYTASGWPSVSGDALKALSGKVSADFDILDEADDNAEEDPETSIDE
ALATNNEVPSQEPEVSIYGSAYNAFGGGQKGIEACHAIAALCEMCSIGSLISNFILPLQG
QDVSGENGRIHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVAAQGNSLIVADY
GQLELRILAHLANCKSMLDAFKAGGDFHSRTAMNMYTHIREAVENGQVLLEWHPQPGEEK
PPVPLLKDAFGSERRKAK

Transcript Sequence

Gene sequence data has not been registered.